|
Occurrence of single base relatives of TATAAT in E.coli genome. F1:-301 to -400; F2:-201 to -300; F3: -101 to -200; F4: -1 to -100. Those elements that are enriched (> = 200%) are marked by an asterisk in the last column. |
|||||||
| Hex |
Total Occ. |
F4 |
F3 |
F2 |
F1 |
Occ. % in F1 |
ENR |
|
|
|||||||
| TCTAAT |
595 |
29 |
30 |
47 |
46 |
7.731092 |
|
| TAGAAT |
507 |
25 |
23 |
36 |
71 |
14.00394 |
* |
| TATAGT |
681 |
19 |
38 |
30 |
87 |
12.77533 |
* |
| TATAAG |
879 |
45 |
32 |
67 |
102 |
11.6041 |
* |
| TACAAT |
903 |
42 |
56 |
71 |
109 |
12.07087 |
* |
| TATAAC |
1590 |
65 |
80 |
94 |
121 |
7.610063 |
|
| TATGAT |
1539 |
63 |
111 |
94 |
127 |
8.252112 |
|
| TATACT |
620 |
39 |
40 |
62 |
131 |
21.12903 |
* |
| CATAAT |
2448 |
90 |
106 |
115 |
132 |
5.392157 |
|
| TATAAT |
1036 |
58 |
68 |
78 |
134 |
12.93436 |
* |
| TGTAAT |
1870 |
74 |
80 |
129 |
140 |
7.486631 |
|
| TATCAT |
2082 |
101 |
96 |
128 |
164 |
7.877041 |
|
| TATATT |
1943 |
87 |
130 |
145 |
168 |
8.646423 |
|
| TATTAT |
2280 |
118 |
124 |
155 |
178 |
7.807018 |
|
| GATAAT |
3735 |
125 |
140 |
172 |
201 |
5.381526 |
|
| TATAAA |
2304 |
98 |
144 |
177 |
236 |
10.24306 |
* |
| TTTAAT |
3671 |
182 |
205 |
219 |
249 |
6.782893 |
|
| TAAAAT |
2947 |
142 |
159 |
204 |
268 |
9.093994 |
|
| AATAAT |
4132 |
188 |
201 |
287 |
287 |
6.945789 |
|
Sivaraman et al. Theoretical Biology and Medical Modelling 2005 2:20 doi:10.1186/1742-4682-2-20 |
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