|
REase (DNase) enzymesHSV-2 genome cutting in > 400 but less 700 sites |
|
| Enzyme name |
Genomic splices (palindrome) |
|
|
|
| AccB1I |
403 (g/gyrcc) |
| AcyI |
671(gr/cgyc) |
| AfaI |
426 (gt/ac) |
| AluI |
456 (ag/ct) |
| Ama87I |
613 (c/ycgrg) |
| AvaI |
613 (c/ycgrg) |
| AvaII |
613 (g/gwcc) |
| BanI |
403 (g/gyrcc) |
| BanII |
520 (grgcy/c) |
| BbiII |
671 (gr/cgyc) |
| BbvI |
613 (gcagc) |
| BcoI |
613 (c/ycgrg) |
| BglI |
316 (gccnnnn/nggc) |
| Bme18I |
613 (g/gwcc) |
| BsaHI |
671 (gr/cgyc) |
| BsaOI |
634 (cgry/cg) |
| Bse118I |
428 (r/ccggy) |
| Bsh1285I |
634 (cgry/cg) |
| BshNI |
403 (g/gyrcc) |
| BsiEI |
634 (cgry/cg) |
| BsmFI |
668 (gggac) |
| BsoBI |
613 (c/ycgrg) |
| Bsp143I |
449 (/gatc) |
| Bsp143II |
562 (rgcgc/y) |
| BsrFI |
428 (r/ccggy) |
| BssAI |
428 (r/ccggy) |
| Bst71I |
613 (gcagc) |
| BstDSI |
699 (c/crygg) |
| BstH2I |
562 (rgcgc/y) |
| BstMCI |
634 (cgry/cg) |
| Cfr10I |
428 (r/ccggy) |
| Cfr42I |
400 (ccgc/gg) |
| CfrI |
698 (y/ggccr) |
| Csp6I |
426 (g/tac) |
| DpnI |
449 (ga/tc) |
| DpnII |
449 (/gatc) |
| DraII |
450 (rg/gnccy) |
| DsaI |
699 (c/crygg) |
| EaeI |
698 (y/ggccr) |
| Eco24I |
520 (grgcy/c) |
| Eco47I |
613 (g/gwcc) |
| Eco52I |
338 (c/ggccg) |
| Eco64I |
403 (g/gyrcc) |
| Eco88I |
613 (c/ycgrg) |
| EcoO109I |
450 (rg/gnccy) |
| FriOI |
520 (grgcy/c) |
| GsuI |
170 (ctggag) |
| HaeII |
562 (rgcgc/y) |
| HgiEI |
613 (g/gwcc) |
| Hin1I |
671 (gr/cgyc) |
| Hsp92I |
671 (gr/cgyc) |
| Hsp92II |
434 (catg/) |
| KspI |
400 (ccgc/gg) |
| Kzo9I |
449 (/gatc) |
| MaeII |
581 (a/cgt) |
| MboI |
449 (/gatc) |
| Msp17I |
671 (gr/cgyc) |
| MspA1I |
633 (cmg/ckg) |
| NdeII |
449 (/gatc) |
| NlaIII |
434 (3168 catg/) |
| NspBII |
633 (cmg/ckg) |
| RsaI |
426 (gt/ac) |
| SacII |
400 (ccgc/gg) |
| Sau3AI |
449 (/gatc) |
| Sfr303I |
400 (ccgc/gg) |
| SinI |
613 (g/gwcc) |
| SstII |
400 (ccgc/gg) |
| TaqI |
503 (t/cga) |
| TthHB8I |
503 (t/cga) |
|
69 total enzymes | |
Wayengera et al. Theoretical Biology and Medical Modelling 2008 5:18 doi:10.1186/1742-4682-5-18 |
|