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Research   Open Access

Does codon bias have an evolutionary origin?

Jan C Biro Theoretical Biology and Medical Modelling 2008, 5:16 (30 July 2008)

Abstract | Full text | PDF | PubMed

Research   Open Access

The velocity of the arterial pulse wave: a viscous-fluid shock wave in an elastic tube

Page R Painter Theoretical Biology and Medical Modelling 2008, 5:15 (29 July 2008)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Amendments to the model previously used for pulse-wave velocity (PWV) show that increases in PWV in certain diseases may be due to reduced force of myocardial contraction, rather than arterial stiffness.

Research   Open Access

Correlation between nucleotide composition and folding energy of coding sequences with special attention to wobble bases

Jan C Biro Theoretical Biology and Medical Modelling 2008, 5:14 (29 July 2008)

Abstract | Full text | PDF | PubMed | 1 comment

Research   Open Access

Heterogeneity in multistage carcinogenesis and mixture modeling

Sandro Gsteiger, Stephan Morgenthaler Theoretical Biology and Medical Modelling 2008, 5:13 (21 July 2008)

Abstract | Full text | PDF | PubMed

Commentary   Open Access

Fractal parameters and vascular networks: facts & artifacts

Daniele Mancardi, Gianfranco Varetto, Enrico Bucci, Fabrizio Maniero, Caterina Guiot Theoretical Biology and Medical Modelling 2008, 5:12 (17 July 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access Highly Accessed

Introduction of an agent-based multi-scale modular architecture for dynamic knowledge representation of acute inflammation

Gary An Theoretical Biology and Medical Modelling 2008, 5:11 (27 May 2008)

Abstract | Full text | PDF | PubMed

Research   Open Access

Origin of the blood hyperserotonemia of autism

Skirmantas Janušonis Theoretical Biology and Medical Modelling 2008, 5:10 (22 May 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Probability landscapes for integrative genomics

Annick Lesne, Arndt Benecke Theoretical Biology and Medical Modelling 2008, 5:9 (20 May 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access Highly Accessed

A mathematical model of glutathione metabolism

Michael C Reed, Rachel L Thomas, Jovana Pavisic, S Jill James, Cornelia M Ulrich, H Frederik Nijhout Theoretical Biology and Medical Modelling 2008, 5:8 (28 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

A statistical model for the identification of genes governing the incidence of cancer with age

Kiranmoy Das, Rongling Wu Theoretical Biology and Medical Modelling 2008, 5:7 (16 April 2008)

Abstract | Full text | PDF | PubMed | 1 comment

Research   Open Access

Functional mapping imprinted quantitative trait loci underlying developmental characteristics

Yuehua Cui, Shaoyu Li, Gengxin Li Theoretical Biology and Medical Modelling 2008, 5:6 (17 March 2008)

Abstract | Full text | PDF | PubMed

Research   Open Access

Scaling, growth and cyclicity in biology: a new computational approach

Pier Delsanto, Antonio S Gliozzi, Caterina Guiot Theoretical Biology and Medical Modelling 2008, 5:5 (29 February 2008)

Abstract | Full text | PDF | PubMed

Software   Open Access Highly Accessed

Sampling and sensitivity analyses tools (SaSAT) for computational modelling

Alexander Hoare, David G Regan, David P Wilson Theoretical Biology and Medical Modelling 2008, 5:4 (27 February 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Variance in multiplex suspension array assays: A distribution generation machine for multiplex counts

Brian P Hanley Theoretical Biology and Medical Modelling 2008, 5:3 (28 January 2008)

Abstract | Full text | PDF | PubMed

Research   Open Access

A mathematical model of venous neointimal hyperplasia formation

Paula Budu-Grajdeanu, Richard C Schugart, Avner Friedman, Christopher Valentine, Anil K Agarwal, Brad H Rovin Theoretical Biology and Medical Modelling 2008, 5:2 (23 January 2008)

Abstract | Full text | PDF | PubMed

Review   Open Access Highly Accessed

The Peter Pan paradigm

J Craig Cohen, Janet E Larson Theoretical Biology and Medical Modelling 2008, 5:1 (8 January 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | 1 comment

Research   Open Access

Simulating non-small cell lung cancer with a multiscale agent-based model

Zhihui Wang, Le Zhang, Jonathan Sagotsky, Thomas S Deisboeck Theoretical Biology and Medical Modelling 2007, 4:50 (21 December 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

A unified framework of immunological and epidemiological dynamics for the spread of viral infections in a simple network-based population

David M Vickers, Nathaniel D Osgood Theoretical Biology and Medical Modelling 2007, 4:49 (20 December 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | 2 comments

Research   Open Access Highly Accessed

Reconstruction and flux analysis of coupling between metabolic pathways of astrocytes and neurons: application to cerebral hypoxia

Tunahan Çakιr, Selma Alsan, Hale Saybaşιlι, Ata Akιn, Kutlu Ö Ülgen Theoretical Biology and Medical Modelling 2007, 4:48 (10 December 2007)

Abstract | Full text | PDF | PubMed | F1000 Biology

Research   Open Access Highly Accessed

Measuring the functional sequence complexity of proteins

Kirk K Durston, David KY Chiu, David L Abel, Jack T Trevors Theoretical Biology and Medical Modelling 2007, 4:47 (6 December 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Simulation of propofol anaesthesia for intracranial decompression using brain hypothermia treatment

Lu Gaohua, Hidenori Kimura Theoretical Biology and Medical Modelling 2007, 4:46 (29 November 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Review   Open Access Highly Accessed

The Proteomic Code: a molecular recognition code for proteins

Jan C Biro Theoretical Biology and Medical Modelling 2007, 4:45 (13 November 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Review   Open Access Highly Accessed

Inflammation: a way to understanding the evolution of portal hypertension

María-Angeles Aller, Jorge-Luis Arias, Arturo Cruz, Jaime Arias Theoretical Biology and Medical Modelling 2007, 4:44 (13 November 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Regular mosaic pattern development: A study of the interplay between lateral inhibition, apoptosis and differential adhesion

Gregory J Podgorski, Mayank Bansal, Nicholas S Flann Theoretical Biology and Medical Modelling 2007, 4:43 (31 October 2007)

Abstract | Full text | PDF | PubMed

Research   Open Access

Coordination of the dynamics of yeast sphingolipid metabolism during the diauxic shift

Fernando Alvarez-Vasquez, Kellie J Sims, Eberhard O Voit, Yusuf A Hannun Theoretical Biology and Medical Modelling 2007, 4:42 (31 October 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

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