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Items 1 - 20 of 141
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1:

Sampling and sensitivity analyses tools (SaSAT) for computational modelling.

Hoare A, Regan DG, Wilson DP.

Theor Biol Med Model. 2008 Feb 27;5:4.

PMID: 18304361 [PubMed - indexed for MEDLINE]

2:

PYCHEM: a multivariate analysis package for python.

Jarvis RM, Broadhurst D, Johnson H, O'Boyle NM, Goodacre R.

Bioinformatics. 2006 Oct 15;22(20):2565-6. Epub 2006 Jul 31.

PMID: 16882648 [PubMed - indexed for MEDLINE]

3:

MBEToolbox: a MATLAB toolbox for sequence data analysis in molecular biology and evolution.

Cai JJ, Smith DK, Xia X, Yuen KY.

BMC Bioinformatics. 2005 Mar 22;6:64.

PMID: 15780146 [PubMed - indexed for MEDLINE]

4:

MetMAP: an integrated Matlab package for analysis and optimization of metabolic systems.

Vera J, Torres NV.

In Silico Biol. 2004;4(2):97-108.

PMID: 15089757 [PubMed - indexed for MEDLINE]

5:

BioBayes: a software package for Bayesian inference in systems biology.

Vyshemirsky V, Girolami M.

Bioinformatics. 2008 Sep 1;24(17):1933-4. Epub 2008 Jul 16.

PMID: 18632751 [PubMed - indexed for MEDLINE]

6:

HDBStat!: a platform-independent software suite for statistical analysis of high dimensional biology data.

Trivedi P, Edwards JW, Wang J, Gadbury GL, Srinivasasainagendra V, Zakharkin SO, Kim K, Mehta T, Brand JP, Patki A, Page GP, Allison DB.

BMC Bioinformatics. 2005 Apr 6;6:86.

PMID: 15813968 [PubMed - indexed for MEDLINE]

7:

Windows .NET Network Distributed Basic Local Alignment Search Toolkit (W.ND-BLAST).

Dowd SE, Zaragoza J, Rodriguez JR, Oliver MJ, Payton PR.

BMC Bioinformatics. 2005 Apr 8;6:93.

PMID: 15819992 [PubMed - indexed for MEDLINE]

8:

InterferenceAnalyzer: tools for the analysis and simulation of multi-locus genetic data.

Viswanath L, Housworth EA.

BMC Bioinformatics. 2005 Dec 12;6:297.

PMID: 16343334 [PubMed - indexed for MEDLINE]

9:

mGrid: a load-balanced distributed computing environment for the remote execution of the user-defined Matlab code.

Karpievitch YV, Almeida JS.

BMC Bioinformatics. 2006 Mar 15;7:139.

PMID: 16539707 [PubMed - indexed for MEDLINE]

10:

SCEW: a Microsoft Excel add-in for easy creation of survival curves.

Khan HA.

Comput Methods Programs Biomed. 2006 Jul;83(1):12-7. Epub 2006 Jun 14.

PMID: 16777258 [PubMed - indexed for MEDLINE]

11:

Statistical Viewer: a tool to upload and integrate linkage and association data as plots displayed within the Ensembl genome browser.

Stenger JE, Xu H, Haynes C, Hauser ER, Pericak-Vance M, Goldschmidt-Clermont PJ, Vance JM.

BMC Bioinformatics. 2005 Apr 12;6:95.

PMID: 15826305 [PubMed - indexed for MEDLINE]

12:

The SBML ODE Solver Library: a native API for symbolic and fast numerical analysis of reaction networks.

Machné R, Finney A, Müller S, Lu J, Widder S, Flamm C.

Bioinformatics. 2006 Jun 1;22(11):1406-7. Epub 2006 Mar 9.

PMID: 16527832 [PubMed - indexed for MEDLINE]

13:

Unbiased descriptor and parameter selection confirms the potential of proteochemometric modelling.

Freyhult E, Prusis P, Lapinsh M, Wikberg JE, Moulton V, Gustafsson MG.

BMC Bioinformatics. 2005 Mar 10;6:50.

PMID: 15760465 [PubMed - indexed for MEDLINE]

14:

Systems Biology Toolbox for MATLAB: a computational platform for research in systems biology.

Schmidt H, Jirstrand M.

Bioinformatics. 2006 Feb 15;22(4):514-5. Epub 2005 Nov 29.

PMID: 16317076 [PubMed - indexed for MEDLINE]

15:

CGHPRO -- a comprehensive data analysis tool for array CGH.

Chen W, Erdogan F, Ropers HH, Lenzner S, Ullmann R.

BMC Bioinformatics. 2005 Apr 5;6:85.

PMID: 15807904 [PubMed - indexed for MEDLINE]

17:

ScrumPy: metabolic modelling with Python.

Poolman MG.

Syst Biol (Stevenage). 2006 Sep;153(5):375-8.

PMID: 16986321 [PubMed - indexed for MEDLINE]

18:

CellTrack: an open-source software for cell tracking and motility analysis.

Sacan A, Ferhatosmanoglu H, Coskun H.

Bioinformatics. 2008 Jul 15;24(14):1647-9. Epub 2008 May 29.

PMID: 18511469 [PubMed - indexed for MEDLINE]

19:

Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox.

Becker SA, Feist AM, Mo ML, Hannum G, Palsson BØ, Herrgard MJ.

Nat Protoc. 2007;2(3):727-38.

PMID: 17406635 [PubMed - indexed for MEDLINE]

20:

YANA - a software tool for analyzing flux modes, gene-expression and enzyme activities.

Schwarz R, Musch P, von Kamp A, Engels B, Schirmer H, Schuster S, Dandekar T.

BMC Bioinformatics. 2005 Jun 1;6:135.

PMID: 15929789 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 141
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